Publications
All papers arising from the Network (including conference
proceedings) should be sent to Nigel Mason
for filing, and full details of the paper (Title, Authors and Journal Ref.) sent
to the web site editor, so that it can be
added to this page. Please remember to acknowledge the Network in your papers!
Published Papers
2008
Chromatin structure influences the sensitivity of DNA to γ-radiation.
Falk M., Lukasova E, Kozubek S.
Biochim Biophys Acta MCR 1783(12) 2398-2414. (2008)
Local changes of higher-order chromatin structure during DSB-repair.
Falk M., Lukasova E., Gabrielova B., Ondrej V., Kozubek S.
Journal of Physics Conference Series 101 (2008) 012018
2007
Chromatin dynamics during DSB repair
Martin Falk, Emilie Lukasova, Barbora Gabrielova, Vladan Ondrej, Stanislav Kozubek
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research Volume 1773, Issue 10,October 2007, Pages 1534-1545.
Disinfection of Cryptosporidium parvum oocysts in drinking water using natural sunlight and the photocatalyst TiO2.
Méndez-Hermida F, Ares-Mazás E, McGuigan KG, Boyle M, Sichel C, Fernández-Ibáñez P.
J Photochem Photobiol B. (2007) 88: 105-11
2006
Electron-loss and target ionization cross sections for water vapor by 20-150 keV neutral atomic hydrogen impact
F. Gobet, S. Eden, B. Coupier, J. Tabet, B. Farizon, M. Farizon, M.J. Gaillard, S. Ouaskit, M. Carré, and T.D. Märk
Chem. Phys. Lett. 421 (2006) 68
Electron spectroscopy in proton collisions with dry gas phase uracil base
P.Moretto-Capelle and A. Le Padellec
Phys.Rev.A 74 (2006) 062705
Ion-Induced Biomolecular Radiation Damage: From Isolated Nucleobases to Nucleobase
Clusters
Thomas Schlathölter, Fresia Alvarado, Sadia Bari, Aurelie Lecointre,
Ronnie Hoekstra, Virgil Bernigaud, Bruno Manil, Jimmy Rangama, and
Bernd Huber
ChemPhysChem 2006, 7, 2339 – 2345
Batch solar disinfection (SODIS) inactivates oocysts of Cryptosporidium
parvum and cysts of Giardia muris in drinking water.
McGuigan KG, Méndez-Hermida F, Castro-Hermida JA, Ares-Mazás E, Kehoe SC, Boyle
M, Sichel C, Fernández-Ibáñez P, Meyer BP, Ramalingham S, Meyer EA.
J Appl Microbiol. 2006;101(2):453-463
Quantification of ion-induced molecular fragmentation of isolated
2-deoxy-D-ribose molecules
Fresia Alvarado, Sadia Bari, Ronnie Hoekstra and Thomas Schlathölter
Phys. Chem. Chem. Phys. 8 (2006) 1922
Modification of DNA radiolysis by DNA-binding proteins. Structural aspects.
Davídková, M., Štísová, V., Goffinont, S., Gillard, N., Castaing, B.,
Spotheim-Maurizot, M.
Radiation Protection Dosimetry, 2005, submitted.
High resolution VUV photoabsorption cross section of Dimethylsulphoxide
(CH3)2SO
L Drage, P Cahillane, S Spyros, N J Mason, S V Hoffmann and P Limão- Vieira
Chem. Phys. Lett., (2006) to be submitted.
Acetic acid electronic state spectroscopy by high-resolution VUV
photo-absorption, electron impact, He(I) photoelectron spectroscopy and ab
initio calculations
P Limão-Vieira, A Giuliani, M-J Hubin-Franskin, J Delwiche, R Parafita, R Mota,
D Duflot, J-P Flament, E Drage, P Cahillane, N J Mason, S V Hoffmann
Chem. Phys., in press.
Batch solar disinfection (SODIS) inactivates oocysts of Cryptosporidium
parvum and cysts of Giardia muris in drinking water.
McGuigan KG*, Méndez-Hermida F, Castro-Hermida JA, Ares-Mazás E, Kehoe SC, Boyle
M, Sichel C, Fernández-Ibáñez P, Meyer BP, Ramalingham S, Meyer EA J. Appl.
Microbiol. In press. 2006.
VUV electronic spectroscopy of water under cellular conditions
R Mota, R Parafita, M J P Maneira, N J Mason, G Garcia, P A Ribeiro, M Raposo
and P Limão-Vieira
Radiat. Prot. Dosim., (2006)submitted in 2005.
Inelastic scattering and stopping power of electrons in methane based
tissue equivalent materials at intermediate and high energies, 10 – 10000 eV
J C Oller, A Muñoz, J M Pérez, F Blanco, P Limão-Vieira, G Garcia
Chem. Phys. Lett., in press.
Radiobiological Yeast Cell Experiments Using Self Assembled Monolayer
Technology
R. Plukienė, Š. Vaitekonis, E. Stanaitytė and D.Čitavičius
Lithuanian Journal of Physics (submitted for publication in 2006)
Radiation damage to DNA-protein specific complexes: Estrogen response element
– estrogen receptor complex.
Štísová, V., Goffinont, S., Spotheim-Maurizot, M., Davídková, M.
Radiation Protection Dosimetry, 2005, submitted.
2005
Dissociation of water molecules upon keV H+- and Heq+-induced ionization
F. Alvarado, R. Hoekstra, T. Schlathölter
J. Phys. B: At. Mol. Opt. Phys. 38 (2005) 4085–4094
Radiolysis of DNA-protein complexes.
Běgusová, M., Gillard, N., Sy, D., Castaing, B., Charlier, M.,
Spotheim-Maurizot, M.
Radiation Physics and Chemistry, (2005) 72, 265-270.
Electron impact ionization of C3H8: appearance
energies and temperature effects
Denifl S., Matejčík S., Skalný J. D., Stano M., Mach P., Urban J., Scheier P.,
Märk T. D., Barszczewska W.
Chem. Phys. Lett. 402 (2005), 80 –87.
Electron impact ionization of CH3D and CD4 near
threshold: Isotope and temperature effects
Denifl S., Matejcik S., Skalny J. D., Mark T. D.
Int. J. of Mass Spectrom 248 (2005), 29-35.
Positive and negative ion formation via slow electron collisions with
5-bromouridine
S. Denifl, P. Candori, S. Ptasinska, P. Limao-Vieira, V. Grill, T.D. Märk, P.
Scheier
Eur. Phys. J. D 35 (2005) 391-398
http://www2.uibk.ac.at/ionen-angewandte-physik/nanobio/publ/papers/epjd35_391.pdf)
Ab initio and experimental study of the K-shell spectra of
2,5-dihydrofuran.
D.Duflot, J.-P. Flament, A. Giuliani, J. Heinesch, and M.-J. Hubin-Franskin.
Chemical Physics, 310 (2005) 67-75.
Negative corona discharge in flowing N2O and its mixtures with
N2 and O2
Galuska D., Manole D., Vladoiu R., Matejcik S., Skalny J. D.
J. Opt. Elec. and Adv. Mat. 7 (2005), 2371-2378.
Temperature dependence of electron attachment to CHCl2Br a
crossed beams study
I. Ipolyi, S. Matejcik, and E. Illenberger
Eur. Phys. J. D 35 (2005) 257-260
Temperature dependences in dissociative electron attachment to CCl3Br
I. Ipolyi, M. Stano, S. Matejčík
Acta Phys. Slov., 55 (2005) 531
A new probe for ion temperature measurements in the tokamak scrape-off
layer
Kocan M., Panek R., Gunn J. P., Stockel J., Skalny J. D.
ECA 29C (2005), P- 2.008
Reactions in trifluoroacetic acid (CF3COOH) induced by low energy electron
attachment
Judith Langer, Michal Stano, Sascha Gohlke, Victor Foltin, Stefan Matejcik,
Eugen Illenberger
Chem. Phys. Lett. 419 (2005) 228–232
Low energy electron driven reactions in single formic acid molecules (HCOOH)
and their homogeneous clusters
I Martin, T. Skalicky, J. Langer, H. Abdoul-Carime, G. Karwasz, E. Illenberger,
M. Stano, S. Matejcik,
Phys . Chem. Chem. Phys . 7 (2005) 2212 -2216
Elastic scattering of electrons from tetrahydrofuran molecule.
R. Milosavljević, A. Giuliani, D. Šević, M.-J.Hubin-Franskin, and B.P.Marinković.
European Journal of Physics. D, 35 (2005) 239-248
Water VUV electronic state spectroscopy by synchrotron radiation.
R. Mota, R. Parafita, A. Giuliani, M.-J. Hubin-Franskin, J.M.C. Lourenço, G.
Garcia, S.V. Hoffmann, N.J. Mason, P.A. Ribeiro, M. Raposo, and P. Limão-Vieira.
Chem. Phys. Lett. 416 (2005) 152-159.
Dissociative electron attachment to gas phase alanine
Ptasinska, S. Denifl, P. Candori, S. Matejcik, P. Scheier, T.D. Märk,
Chem. Phys. Lett., 403 (2005) 107-112
Bond- and Site-Selective Loss of H- from Pyrimidine Bases
S. Ptasinska, S. Denifl, V. Grill, T.D. Märk, E. Illenberger and P. Scheier
Phys. Rev. Lett. 95 (2005) 093201
(http://www2.uibk.ac.at/ionen-angewandte-physik/nanobio/publ/papers/prl95_093201.pdf),
also selected for the Virtual Journal of Biological Physics Research 10(2005)
issue 5
Dissociative ionization of the nucleosides thymidine and uridine by
electron impact
S. Ptasinska, P. Candori, S. Denifl, S. Yoon, V. Grill, P. Scheier and T.D.Märk
Chem. Phys. Lett. 409 (2005) 270-276
(http://www2.uibk.ac.at/ionen-angewandte-physik/nanobio/publ/papers/cpl409_270.pdf)
Electron attachment to monomeric and dimeric forms of glycolaldehyde.
S. Ptasinska, P. Limao-Vieira, S. Denifl, P. Scheier and T.D. Märk
Chem. Phys.Lett. 401 (2005) 227-231
(http://www2.uibk.ac.at/ionen-angewandte-physik/nanobio/publ/papers/cpl401_227.pdf)
Reactions in condensed formic acid (HCOOH) induced by low energy (<20eV)
electrons
T. Sedlacko, R. Balog, A. Lafosse, M. Stano, S. Matejcik, R. Azria, E.
Illenberger
Phys. Chem. Chem. Phys. , 7 (2005) 12777-1282
2004
Ionization of water by 20-150 keV protons: separation of direct ionization and electron capture processes
F. Gobet, S. Eden, B. Coupier, J. Tabet, B. Farizon, M. Farizon, M.J. Gaillard, M. Carré, S. Ouaskit, T.D. Märk, and P. Scheier
Phys. Rev. A 70 (2004) 062716
Sensitization of 5-Bromouridine by slow electrons
H Abdoul-Carime, P Limão-Vieira, S Gohlke, I Petrushko, N J Mason E Illenberger
Chem. Phys. Lett., 393 (2004) 442 – 447.
On the valence shell spectroscopy of 2-vinyl furan and its relationship
with linear polynenes
A Giuliani, I Walker, J Delwiche, S V Hoffmann, C Kech, P Limão- Vieira, N J
Mason and M-J Hubin-Franskin
J. Chem. Phys., 120 (2004) 10972 – 10982
The effect of ozone treatment on the microbial contamination of pork meat
measured by detecting the emissions using PTR-MS and by enumeration of
microorganisms
Jaksch D., Margesin R., Mikoviny T., Skalny J. D., Hartungen E., Schinner F.,
Mason N. J., Märk T. D.
Int. J. of Mass Spectrom. 239 (2004), 209-214.
An experimental study of SF5CF3 by electron energy loss spectroscopy, VUV
photo-absorption and photoelectron spectroscopy
P Limão-Vieira, S Eden, P A Kendall, N J Mason, A Giuliani, J Heinesch, M-J
Hubin-Franskin, J Delwiche and S V Hoffmann
Int. J. Mass Spectrom., 233 (2004) 335 – 341.
Yeast Saccharomyces cerevisiae response to UV and Gamma Irradiation
B. Remeikytė, R. Plukienė, D. Čitavičius, V. Remeikis, Š. Vaitekonis
Environmental and Chemical Physics, Vol. 26, No 4, (2004) pp. 148-156. (Issued
in January 2005)
The electronic states of isoxazole studied by VUV absorption, electron
energy-loss spectroscopies and ab initio multi-reference configuration
interaction calculations
I C Walker, M H Palmer, J Delwiche, S V Hoffman, P Limão-Vieira, N J Mason, M F
Guest, M-J Hubin-Franskin, J Heinesch and A Giuliani
Chem. Phys., 297 (2004) 289-306.
Conference Proceedings
2006
Solar Disinfection of diarrhoeal pathogen Yersinia enterocolitica in drinking water -
A laboratory study
M. Boyle, C. Sichel, P. Fernandez, KG McGuigan.
Poster Presentation submitted to American Society for Microbiology conference in
Orlando, FLA, USA, May 2006.
2005
Temperature effects on dissociative electron attachment to HBr, Book of
Abstracts of Negative Ions, Experiment and theory
Fedor J., Skalny J. D., Scheier P., Horacek J., Stamatovic A., Mark T. D.
Smolenice (Slovakia), 2005, pp. 27
Biomolecular chemistry with synchrotron radiation
P J Gomes, Q Ferreira, J M C Lourenço, P A Ribeiro, M Raposo and P Limão-Vieira
5th Iberian Vacuum Meeting, Guimarães, Portugal (2005) 149.
Ion mobility study of the negative ions formed in negative corona
discharge in mixtures of halogenated molecules with dry air
Husarik J., Stano M., Skalny D., Matejcik S.
In Proc. 15th Symposium on Applications of Plasma Processes and 3rd EU-Japan
Joint Symposium on Plasma Processing : Book of Contributed Papers. (Edit. Hensel
K., Matejčík Š., Skalný, J. D., Mason, N. J., Bratislava : Comenius University
Press, 2005, pp. 179 –180, ISBN 80-223-2018-8.
Mobility spectrometry of ions formed in
negative corona discharge in oxygen
Janky F., Stano M., Husarik J., Skalny J. D., Matejcik S
Book of Abstracts of Negative Ions, Experiment and theory, Smolenice (Slovakia),
2005, pp. 43.
Mobility spectrometry of ions formed in negative corona discharge in O2
Janky F., Stano M., Husarik J., Matejcik S., Skalny J. D.
Book of Contributed Papers of the XVIth Symposium on Physics of Switching Arc of
Negative Ions, Brno (Czech Rep.), 2005, Vol. 1 pp. 101-104
Electron scattering from cytosine at intermediate and high energies
P Kendall, J Coller, F Blanco, J Rosado, P Limão-Vieira and G García
RADAM Conf., Radiation Damage in Biomolec. Systems, Potsdam, Berlin (2005) 44.
Particle-in cell simulations of segmented tunnel probe for ion temperature
measurements in the tokamak scrape-off layer
Kocan M., Panek R., Gunn J. P., Stőckel J., Skalny J. D. Kuhn. S, Tskhakaya
Proc. Of Int. Conf. Nuclear Energy for New Europe 2005, Bled (Slovenia), pp.
11-12.
Particle simulations of the non-linear electron dynamics in the classical
Pierce diode
Kocan M., Kuhn S., Tskhakaya D., Skalny J.
Book of Abstracts of Joint conference of 19th Int. Conf. on Numerical Simulation
of Plasmas and 7th Asia Pacific Plasma Theory Conference, Nara (Japan), 2005,
pp. 50-51.
Electron transfer by atom (potassium) – biomolecule (DNA bases) collisions
V Kokhan, R Parafita, R Mota, N J Mason, G Garcia, Maneira and P Limão-Vieira
VII Iberian Joint Meeting on Atomic and Molecular Physics, Lisboa (2005) 45.
Electron transfer in biomolecules by atomic scattering
V Kokhan, R Parafita, R Mota, N J Mason, G Garcia, M J P Maneira and P Limão-Vieira
RADAM Conf., Radiation Damage in Biomolec. Systems, Potsdam, Berlin (2005) 56.
Probing the Mechanisms of DNA Damage; New experiments with light and
electrons
N J Mason, M A Smialek, D Jaksch, P Cahillane, S A Moore and P Limão- Vieira
VII Iberian Joint Meeting on Atomic and Molecular Physics, Lisboa (2005) 18.
VUV electronic state spectroscopy of water
R Mota, R Parafita, N J Mason and P Limão-Vieira
RADAM Conf., Radiation Damage in Biomolec. Systems, Potsdam, Berlin (2005) 55.
The electronic state spectroscopy of acetic studied by VUV synchrotron
radiation, electron energy loss and He(I) photoelectron spectroscopy
R Mota, R Parafita, A Giuliani, M-J Hubin-Franskin, J Delwiche, E Drage, P
Cahillane, N J Mason and P Limão-Vieira
RADAM Conf., Radiation Damage in Biomolec. Systems, Potsdam, Berlin (2005) 57.
Water (bio)molecule studied by VUV synchrotron radiation
R Mota, R Parafita, N J Mason and P Limão-Vieira
VII Iberian Joint Meeting on Atomic and Molecular Physics, Lisboa (2005) 46.
Spectroscopic studies of valence, Rydberg and ionic states of acetic acid,
CH3COOH
R Mota, R Parafita, A Giuliani, M-J Hubin-Franskin, J Delwiche, D Duflot, J-P
Flament, E Drage, P Cahillane, N J Mason and P Limão- Vieira
XXIV ICPEAC, Rosário, Argentina (2005) 108.
The electronic states of acetic acid studied by photon absorption and
electron impact spectroscopies
R Mota, R Parafita, A Giuliani, M-J Hubin-Franskin, J Delwiche, D Duflot, J-P
Flament, E Drage, P Cahillane, N J Mason and P Limão- Vieira
VII Iberian Joint Meeting on Atomic and Molecular Physics, Lisboa (2005) 42.
Radiation damage in cellular environment: the case of water
R Mota, R Parafita, N J Mason, G Garcia and P Limão-Vieira
14th Symposium on Microdosimetry, Venetia, Italy (2005) A10.
W- values and stopping powers for electrons in methane based tissue
equivalent materials from 10 to 10000 eV
A Muñoz, J C Oller, J M Pérez, A Williart, F Blanco, P Limão-Vieira and G.
García
14th Symposium on Microdosimetry, Venetia, Italy (2005) A9.
Decomposition of ozone produced in negative corona discharge
fed by air, oxygen an carbon dioxide
Orszagh J., Skalny J. D., Mason N. J.
Book of Abstracts of Negative Ions, Experiment and theory, Smolenice (Slovakia),
2005, pp. 36.
Irradiation of Yeast Cells Monolayer
R. Plukienė, Š. Vaitekonis, B. Remeikytė
June 7-12 (2005), EYIC2005 Gniezno, Poland
Radiobiological Yeast Cell Experiments Using Self Assembled Monolayer
Technology
R. Plukienė, Š. Vaitekonis, B. Remeikytė and D. Čitavičius
June 16-18 (2005) Vilnius, Lithuania, 36th Lithuanian National Physics
Conference
Decomposition of ozone produced in negative corona discharge fed by air,
oxygen and carbon dioxide
Skalny J. D., Orszagh J., Mason N. J.
In Proc. 15th Symposium on Applications of Plasma Processes and 3rd EU-Japan
Joint Symposium on Plasma Processing : Book of Contributed Papers. (Edit. Hensel
K., Matejčík Š., Skalný, J. D., Mason, N. J., Bratislava : Comenius University
Press, 2005, pp. 243-244, ISBN 80-223-2018-8.
Ion mobility in a negative corona discharge containing mixtures of nitrous
oxide and oxygen
Skalny J. D., Matejcik S., Mason N. J.
Gaseous Dielectrics X, Edit. L. G. Christophorou, J. K. Olthoff, P. Vassiliou,
Springer Sciences-Business Media, Inc., (2004), ISBN 0-387-23298-2, pp. 143-148.
(fyzicky bola vydaná až v roku 2005)
Mobility spectrometry of ions in positive corona discharge
Stano M., Husarik J., Janky F., Skalny J. D., Matejcik S.
Book of Contributed Papers of the XVIth Symposium on Physics of Switching Arc of
Negative Ions, Brno (Czech Rep.), 2005, Vol. 1 pp. 174-177.
Role of excited atomic O(1D) and molecular O2(1Dg)
states in generation of ozone in negative corona discharge fed by oxygen
Tarana M, Kocan M., Matejcik S., Skalny D.
In Proc. 15th Symposium on Applications of Plasma Processes and 3rd EU-Japan
Joint Symposium on Plasma Processing : Book of Contributed Papers. (Edit. Hensel
K., Matejčík Š., Skalný, J. D., Mason, N. J., Bratislava : Comenius University
Press, 2005, pp. 253 -254, ISBN 80-223-2018-8.
Radiobiological Yeast Saccharomyces Cerevisiae cell array experiments
using SAM technology
Š. Vaitekonis, R. Plukienė, A. Plukis, V. Remeikis and D. Čitavičius
March 17-20 (2005), RADAM05 Potsdam, Germany
SAM Technology for Yeast Saccharomyces Cerevisiae Cells Irradiation
Š. Vatekonis, R. Valiokas, R. Plukienė, V. Remeikis and D. Čitavičius
June 7-12 (2005), EYIC2005 Gniezno, Poland
2004
Electronic states of tetrahydrofuran studied by vacuum ultraviolet
photoabsorption
A Giuliani, P. Limão-Vieira, E Vasekova, João M C Lourenço, P M Santos, J
Delwiche, N. J. Mason and M-J Hubin-Franskin
RADAM Conf., Radiation Damage in Biomolecular Systems, Lyon, France (2004) 54.
Electronic state spectroscopy of acetic acid by VUV photoabsorption
P. Limão-Vieira, A Giuliani, E Drage, P Cahillane, R Mota and N. J. Mason
RADAM Conf., Radiation Damage in Biomolecular Systems, Lyon, France (2004) 61.
Inelastic electron interaction (attachment/ionization) with sugar
molecules and amino acids
S. Ptasińska, S. Denifl, P. Candori, P. Limão-Vieira, P. Scheier and T. D. Märk
ION 2004 – V International Conference on Ion Implantation and Other Applications
of Ions and Electrons, Kazimierz Dolny, Poland, (2004) P- We-15.
Damage of sugar molecules by electron impact
Sylwia Ptasińska, Stephan Paul Denifl, Paulo Limão-Vieira, Paul Scheier and
Tilmann D Märk
8th Eur. Conf. on Atomic and Molecular Physics, Rennes, France, vol. II (2004)
13-15
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